731 lines
74 KiB
Plaintext
731 lines
74 KiB
Plaintext
# Awesome R
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[](https://github.com/sindresorhus/awesome)
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A curated list of awesome R packages and tools. Inspired by [awesome-machine-learning](https://github.com/josephmisiti/awesome-machine-learning).
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<p><img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">
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for <a target="_blank" href="https://github.com/rstudio/RStartHere/blob/master/top_downloads_2016/top_packages">Top 50</a> CRAN downloaded packages or repos with 400+
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<img class="emoji" alt="star" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/star.png" height="20" align="absmiddle" width="20"></p>
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- [Awesome R](#awesome-)
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- [2023](#2023)
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- [2020](#2020)
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- [2019](#2019)
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- [2018](#2018)
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- [Integrated Development Environments](#integrated-development-environments)
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- [Syntax](#syntax)
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- [Data Manipulation](#data-manipulation)
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- [Graphic Displays](#graphic-displays)
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- [Html Widgets](#html-widgets)
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- [Reproducible Research](#reproducible-research)
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- [Web Technologies and Services](#web-technologies-and-services)
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- [Parallel Computing](#parallel-computing)
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- [High Performance](#high-performance)
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- [Language API](#language-api)
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- [Database Management](#database-management)
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- [Machine Learning](#machine-learning)
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- [Natural Language Processing](#natural-language-processing)
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- [Bayesian](#bayesian)
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- [Optimization](#optimization)
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- [Finance](#finance)
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- [Bioinformatics and Biostatistics](#bioinformatics-and-biostatistics)
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- [Network Analysis](#network-analysis)
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- [Spatial](#spatial)
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- [R Development](#r-development)
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- [Logging](#logging)
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- [Data Packages](#data-packages)
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- [Other Tools](#other-tools)
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- [Other Interpreters](#other-interpreters)
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- [Learning R](#learning-r)
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- [Resources](#resources)
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- [Websites](#websites)
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- [Books](#books)
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- [Podcasts](#podcasts)
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- [Reference Cards](#reference-cards)
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- [MOOCs](#moocs)
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- [Lists](#lists)
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- [Other Awesome Lists](#other-awesome-lists)
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- [Contributing](#contributing)
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## 2023
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* [Cookbook Polars for R](https://ddotta.github.io/cookbook-rpolars/)
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## 2020
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* [VSCode](https://code.visualstudio.com/) - [vscode-R](https://marketplace.visualstudio.com/items?itemName=Ikuyadeu.r) + [vscode-r-lsp](https://marketplace.visualstudio.com/items?itemName=REditorSupport.r-lsp) VSCode R Langauage Support
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* [gt](https://github.com/rstudio/gt) - Easily generate information-rich, publication-quality tables from R
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* [lightgbm <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://cran.r-project.org/web/packages/lightgbm/index.html) - Light Gradient Boosting Machine.
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* [torch](https://cran.r-project.org/web/packages/torch/index.html) - Tensors and Neural Networks with 'GPU' Acceleration.
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## 2019
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* [ggforce](https://github.com/thomasp85/ggforce) - ggplot2 extension framework 
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* [rayshader](https://github.com/tylermorganwall/rayshader) - 2D and 3D data visualizations via rgl 
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* [vroom](https://github.com/r-lib/vroom) - Fast reading of delimited files 
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## Integrated Development Environments
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*Integrated Development Environment*
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* [VSCode <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://code.visualstudio.com/) - [vscode-R](https://marketplace.visualstudio.com/items?itemName=Ikuyadeu.r) + [vscode-r-lsp](https://marketplace.visualstudio.com/items?itemName=REditorSupport.r-lsp) VSCode R Langauage Support
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* [RStudio <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://www.rstudio.org/) - A powerful and productive user interface for R. Works great on Windows, Mac, and Linux.
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* [Emacs + ESS](http://ess.r-project.org/) - Emacs Speaks Statistics is an add-on package for emacs text editors.
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* [Sublime Text + R-IDE](https://github.com/REditorSupport/sublime-ide-r) - Add-on package for Sublime Text 2/3.
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* [TextMate + r.tmblundle](https://github.com/textmate/r.tmbundle) - Add-on package for TextMate 1/2.
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* [StatET](http://www.walware.de/goto/statet) - An Eclipse based IDE for R.
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* [R Commander](http://socserv.mcmaster.ca/jfox/Misc/Rcmdr/) - A package that provides a basic graphical user interface.
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* [IRkernel <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/IRkernel/IRkernel) - R kernel for Jupyter.
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* [Deducer](http://www.deducer.org/pmwiki/pmwiki.php?n=Main.DeducerManual?from=Main.HomePage) - A Menu driven data analysis GUI with a spreadsheet like data editor.
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* [Radiant](https://radiant-rstats.github.io/docs) - A platform-independent browser-based interface for business analytics in R, based on the Shiny.
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* [Nvim-R <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/jalvesaq/Nvim-R) - Neovim plugin for R.
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* [Jamovi](https://www.jamovi.org/) and [JASP](https://jasp-stats.org/) - Desktop software for both Bayesian and Frequentist methods, using a UI familiar to SPSS users.
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* [Bio7](http://www.bio7.org/) - An IDE contains tools for model creation, scientific image analysis and statistical analysis for ecological modelling.
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* [RTVS](http://microsoft.github.io/RTVS-docs/) - R Tools for Visual Studio.
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* [radian <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/randy3k/radian) (formerly rtichoke) - A modern R console with syntax highlighting.
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* [RKWard](https://rkward.kde.org/) - An extensible IDE/GUI for R.
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## Syntax
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*Packages change the way you use R.*
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* [magrittr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/smbache/magrittr) - Let's pipe it.
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* [pipeR](https://github.com/renkun-ken/pipeR) - Multi-paradigm Pipeline Implementation.
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* [lambda.r](https://github.com/zatonovo/lambda.r) - Functional programming and simple pattern matching in R.
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* [purrr](https://github.com/hadley/purrr) - A FP package for R in the spirit of underscore.js.
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## Data Manipulation
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*Packages for cooking data.*
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* [dplyr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/dplyr) - Fast data frames manipulation and database query.
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* [data.table <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/Rdatatable/data.table) - Fast data manipulation in a short and flexible syntax.
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* [reshape2 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/reshape) - Flexible rearrange, reshape and aggregate data.
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* [tidyr](https://github.com/hadley/tidyr) - Easily tidy data with spread and gather functions.
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* [broom <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/dgrtwo/broom) - Convert statistical analysis objects into tidy data frames.
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* [rlist](https://github.com/renkun-ken/rlist) - A toolbox for non-tabular data manipulation with lists.
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* [ff](http://ff.r-forge.r-project.org/) - Data structures designed to store large datasets.
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* [lubridate](https://github.com/tidyverse/lubridate) - A set of functions to work with dates and times.
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* [stringi <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/gagolews/stringi) - ICU based string processing package.
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* [stringr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/stringr) - Consistent API for string processing, built on top of stringi.
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* [bigmemory](https://github.com/kaneplusplus/bigmemory) - Shared memory and memory-mapped matrices. The big\* packages provide additional tools including linear models ([biglm](http://cran.r-project.org/web/packages/biglm/index.html)) and Random Forests ([bigrf](https://github.com/aloysius-lim/bigrf)).
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* [fuzzyjoin](https://github.com/dgrtwo/fuzzyjoin) - Join tables together on inexact matching.
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* [tidyverse](https://github.com/hadley/tidyverse) - Easily install and load packages from the tidyverse.
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* [snakecase](https://github.com/Tazinho/snakecase) - Automatically parse and convert strings into cases like snake or camel among others.
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* [DataExplorer](https://github.com/boxuancui/DataExplorer) - Fast exploratory data analysis with minimum code.
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## Data Formats
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*Packages for reading and writing data of different formats.*
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* [arrow <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://arrow.apache.org/docs/r/) - An interface to the Arrow C++ library.
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* [feather <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/wesm/feather) - Fast, interoperable binary data frame storage for Python, R, and more powered by Apache Arrow.
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* [fst <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](www.fstpackage.org/fst/) - Lightning Fast Serialization of Data Frames for R.
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* [haven](https://github.com/hadley/haven) - Improved methods to import SPSS, Stata and SAS files in R.
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* [jsonlite](https://github.com/jeroenooms/jsonlite) - A robust and quick way to parse JSON files in R.
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* [qs](https://github.com/traversc/qs) - Quick serialization of R objects.
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* [readxl <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://readxl.tidyverse.org/) - Read excel files (.xls and .xlsx) into R.
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* [readr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/readr) - A fast and friendly way to read tabular data into R.
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* [rio](https://github.com/leeper/rio) - A Swiss-Army Knife for Data I/O.
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* [readODS](https://github.com/chainsawriot/readODS/) - Read OpenDocument Spreadsheets into R as data.frames.
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* [RcppTOML](https://github.com/eddelbuettel/rcpptoml) - Rcpp Bindings to C++ parser for TOML files.
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* [vroom](https://github.com/r-lib/vroom) - Fast reading of delimited files.
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* [writexl](https://docs.ropensci.org/writexl/) - Portable, light-weight data frame to xlsx exporter for R.
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* [yaml](https://github.com/viking/r-yaml) - R package for converting objects to and from YAML.
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## Graphic Displays
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*Packages for showing data.*
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* [ggplot2 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/ggplot2) - An implementation of the Grammar of Graphics.
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* [ggfortify](https://github.com/sinhrks/ggfortify) - A unified interface to ggplot2 popular statistical packages using one line of code.
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* [ggrepel](https://github.com/slowkow/ggrepel) - Repel overlapping text labels away from each other.
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* [ggalt](https://github.com/hrbrmstr/ggalt) - Extra Coordinate Systems, Geoms and Statistical Transformations for ggplot2.
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* [ggstatsplot](https://github.com/IndrajeetPatil/ggstatsplot) - ggplot2 Based Plots with Statistical Details
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* [ggtree](https://github.com/GuangchuangYu/ggtree) - Visualization and annotation of phylogenetic tree.
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* [ggtech](https://github.com/ricardo-bion/ggtech) - ggplot2 tech themes and scales
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* [ggplot2 Extensions](https://ggplot2-exts.github.io/ggiraph.html) - Showcases of ggplot2 extensions.
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* [lattice](https://github.com/deepayan/lattice) - A powerful and elegant high-level data visualization system.
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* [corrplot](https://github.com/taiyun/corrplot) - A graphical display of a correlation matrix or general matrix. It also contains some algorithms to do matrix reordering.
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* [rgl](http://cran.r-project.org/web/packages/rgl/index.html) - 3D visualization device system for R.
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* [Cairo](http://cran.r-project.org/web/packages/Cairo/index.html) - R graphics device using cairo graphics library for creating high-quality display output.
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* [extrafont](https://github.com/wch/extrafont) - Tools for using fonts in R graphics.
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* [showtext](https://github.com/yixuan/showtext) - Enable R graphics device to show text using system fonts.
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* [animation](https://github.com/yihui/animation) - A simple way to produce animated graphics in R, using [ImageMagick](http://imagemagick.org/).
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* [gganimate](https://github.com/dgrtwo/gganimate) - Create easy animations with ggplot2.
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* [misc3d](https://cran.r-project.org/web/packages/misc3d/index.html) - Powerful functions to deal with 3d plots, isosurfaces, etc.
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* [xkcd](https://cran.r-project.org/web/packages/xkcd/index.html) - Use xkcd style in graphs.
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* [imager](http://dahtah.github.io/imager/) - An image processing package based on CImg library to work with images and display them.
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* [hrbrthemes](https://github.com/hrbrmstr/hrbrthemes) - 🔏 Opinionated, typographic-centric ggplot2 themes and theme components.
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* [waffle](https://github.com/hrbrmstr/waffle) - 🍁 Make waffle (square pie) charts in R.
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* [dendextend](https://github.com/talgalili/dendextend) - visualizing, adjusting and comparing trees of hierarchical clustering.
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* [idendro](https://github.com/tsieger/idendro) - interactive exploration of dendrograms (trees of hierarchical clustering).
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* [r2d3](https://rstudio.github.io/r2d3/) - R Interface to D3 Visualizations
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* [Patchwork](https://github.com/thomasp85/patchwork) - Combine separate ggplots into the same graphic.
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* [plot3D](http://www.rforscience.com/rpackages/visualisation/plot3d/) - Plotting Multi-Dimensional Data
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* [plot3Drgl](https://cran.r-project.org/web/packages/plot3Drgl/index.html) - Plotting Multi-Dimensional Data - Using 'rgl'
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* [httpgd](https://github.com/nx10/httpgd) - Asynchronous http server graphics device for R.
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## HTML Widgets
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*Packages for interactive visualizations.*
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* [heatmaply](https://github.com/talgalili/heatmaply) - Interactive heatmaps with D3.
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* [d3heatmap](https://github.com/rstudio/d3heatmap) - Interactive heatmaps with D3 (no longer maintained).
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* [DataTables](http://rstudio.github.io/DT/) - Displays R matrices or data frames as interactive HTML tables.
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* [DiagrammeR <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/rich-iannone/DiagrammeR) - Create JS graph diagrams and flowcharts in R.
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* [dygraphs](https://github.com/rstudio/dygraphs) - Charting time-series data in R.
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* [formattable <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/renkun-ken/formattable) - Formattable Data Structures.
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* [ggvis <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/rstudio/ggvis) - Interactive grammar of graphics for R.
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* [Leaflet](http://rstudio.github.io/leaflet/) - One of the most popular JavaScript libraries interactive maps.
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* [MetricsGraphics](http://hrbrmstr.github.io/metricsgraphics/) - Enables easy creation of D3 scatterplots, line charts, and histograms.
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* [networkD3](http://christophergandrud.github.io/networkD3/) - D3 JavaScript Network Graphs from R.
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* [scatterD3](https://github.com/juba/scatterD3) - Interactive scatterplots with D3.
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* [plotly <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/ropensci/plotly) - Interactive ggplot2 and Shiny plotting with [plot.ly](https://plot.ly).
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* [rCharts <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/ramnathv/rCharts) - Interactive JS Charts from R.
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* [rbokeh](http://hafen.github.io/rbokeh/) - R Interface to [Bokeh](http://bokeh.pydata.org/en/latest/).
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* [threejs](https://github.com/bwlewis/rthreejs) - Interactive 3D scatter plots and globes.
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* [timevis](https://github.com/daattali/timevis) - Create fully interactive timeline visualizations.
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* [visNetwork](https://github.com/datastorm-open/visNetwork) - Using vis.js library for network visualization.
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* [wordcloud2](https://github.com/Lchiffon/wordcloud2) - R interface to wordcloud2.js.
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* [highcharter](https://github.com/jbkunst/highcharter) - R wrapper for highcharts based on htmlwidgets
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* [echarts4r](https://github.com/JohnCoene/echarts4r) - R wrapper to Echarts version 4
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## Reproducible Research
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*Packages for literate programming and reproducible workflows.*
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* [knitr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/yihui/knitr) - Easy dynamic report generation in R.
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* [redoc](https://github.com/noamross/redoc) - Reversible Reproducible Documents
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* [tinytex](https://github.com/yihui/tinytex) - A lightweight and easy-to-maintain LaTeX distribution
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* [xtable](http://cran.r-project.org/web/packages/xtable/index.html) - Export tables to LaTeX or HTML.
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* [rapport](http://rapport-package.info/#intro) - An R templating system.
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* [rmarkdown <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://rmarkdown.rstudio.com/) - Dynamic documents for R.
|
||
* [slidify <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/ramnathv/slidify) - Generate reproducible html5 slides from R markdown.
|
||
* [Sweave](https://www.statistik.lmu.de/~leisch/Sweave/) - A package designed to write LaTeX reports using R.
|
||
* [texreg](https://github.com/leifeld/texreg) - Formatting statistical models in LaTex and HTML.
|
||
* [checkpoint](https://github.com/RevolutionAnalytics/checkpoint) - Install packages from snapshots on the checkpoint server.
|
||
* [brew](https://cran.r-project.org/web/packages/brew/index.html) - Pre-compute data to enhance your report templates. Can be combined with knitr.
|
||
* [officer](https://davidgohel.github.io/officer/index.html) - An R package to generate Microsoft Word, Microsoft PowerPoint and HTML reports.
|
||
* [flextable](https://davidgohel.github.io/flextable/index.html) - An R package to embed complex tables (merged cells, multi-level headers and footers, conditional formatting) in Microsoft Word, Microsoft PowerPoint and HTML reports. It cooperates with the [officer] package and integrates with [rmarkdown] reports.
|
||
* [bookdown](https://bookdown.org/) - Authoring Books with R Markdown.
|
||
* [ezknitr](https://github.com/daattali/ezknitr) - Avoid the typical working directory pain when using 'knitr'
|
||
* [targets](https://docs.ropensci.org/targets/) - Make-like pipeline tool for organizing and running data science workflows, automatically skipping steps that have already been done. Supported by [rOpenSci](https://ropensci.org/).
|
||
* [R Suite](http://rsuite.io) - A package to design flexible and reproducible deployment workflows for R.
|
||
* [kable](https://cran.r-project.org/web/packages/kableExtra/vignettes/awesome_table_in_html.html) - Build fancy HTML or 'LaTeX' tables using 'kable()' from 'knitr'.
|
||
|
||
## Web Technologies and Services
|
||
*Packages to surf the web.*
|
||
|
||
* [Web Technologies List](https://github.com/ropensci/webservices) - Information about how to use R and the world wide web together.
|
||
* [shiny <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/rstudio/shiny) - Easy interactive web applications with R. See also [awesome-rshiny](https://github.com/grabear/awesome-rshiny)
|
||
* [shinyjs](https://github.com/daattali/shinyjs) - Easily improve the user interaction and user experience in your Shiny apps in seconds.
|
||
* [RCurl](http://cran.r-project.org/web/packages/RCurl/index.html) - General network (HTTP/FTP/...) client interface for R.
|
||
* [curl](https://github.com/jeroen/curl) - A Modern and Flexible Web Client for R.
|
||
* [httr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/httr) - User-friendly RCurl wrapper.
|
||
* [httpuv](https://github.com/rstudio/httpuv) - HTTP and WebSocket server library.
|
||
* [XML <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://cran.r-project.org/web/packages/XML/index.html) - Tools for parsing and generating XML within R.
|
||
* [xml2 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://cran.r-project.org/web/packages/xml2/index.html) - Optimized tools for parsing and generating XML within R.
|
||
* [rvest <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/rvest) - Simple web scraping for R, using CSSSelect or XPath syntax.
|
||
* [OpenCPU <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://www.opencpu.org/) - HTTP API for R handling concurrent calls, based on the Apache2 web server, to expose R code as REST web services and create full-sized, multi-page web applications.
|
||
* [Rfacebook](https://github.com/pablobarbera/Rfacebook) - Access to Facebook API via R.
|
||
* [RSiteCatalyst](https://github.com/randyzwitch/RSiteCatalyst) - R client library for the Adobe Analytics.
|
||
* [plumber](https://github.com/trestletech/plumber) - A library to expose existing R code as web API.
|
||
* [golem](https://thinkr-open.github.io/golem/) - A framework for building production-grade Shiny apps.
|
||
|
||
## Parallel Computing
|
||
*Packages for parallel computing.*
|
||
|
||
* [parallel](http://cran.r-project.org/web/views/HighPerformanceComputing.html) - R started with release 2.14.0 which includes a new package parallel incorporating (slightly revised) copies of packages [multicore](http://cran.r-project.org/web/packages/multicore/index.html) and [snow](http://cran.r-project.org/web/packages/snow/index.html).
|
||
* [Rmpi](http://cran.r-project.org/web/packages/Rmpi/index.html) - Rmpi provides an interface (wrapper) to MPI APIs. It also provides interactive R slave environment.
|
||
* [foreach <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://cran.r-project.org/web/packages/foreach/index.html) - Executing the loop in parallel.
|
||
* [future <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://cran.r-project.org/package=future) - A minimal, efficient, cross-platform unified Future API for parallel and distributed processing in R; designed for beginners as well as advanced developers.
|
||
* [SparkR <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/amplab-extras/SparkR-pkg) - R frontend for Spark.
|
||
* [DistributedR](https://github.com/vertica/DistributedR) - A scalable high-performance platform from HP Vertica Analytics Team.
|
||
* [ddR](https://github.com/vertica/ddR) - Provides distributed data structures and simplifies distributed computing in R.
|
||
* [sparklyr](http://spark.rstudio.com/) - R interface for Apache Spark from RStudio.
|
||
* [batchtools](https://cran.r-project.org/package=batchtools) - High performance computing with LSF, TORQUE, Slurm, OpenLava, SGE and Docker Swarm.
|
||
|
||
## High Performance
|
||
*Packages for making R faster.*
|
||
|
||
* [Rcpp <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://rcpp.org/) - Rcpp provides a powerful API on top of R, make function in R extremely faster.
|
||
* [Rcpp11](https://github.com/Rcpp11/Rcpp11) - Rcpp11 is a complete redesign of Rcpp, targetting C++11.
|
||
* [compiler](http://stat.ethz.ch/R-manual/R-devel/library/compiler/html/compile.html) - speeding up your R code using the JIT
|
||
* [cpp11](https://github.com/r-lib/cpp11) - cpp11 is a header-only R package that helps R package developers handle R objects with C++ code. It's similar to Rcpp but with different design trade-offs and features.
|
||
|
||
## Language API
|
||
*Packages for other languages.*
|
||
|
||
* [rJava](http://cran.r-project.org/web/packages/rJava/) - Low-level R to Java interface.
|
||
* [jvmr](https://github.com/cran/jvmr) - Integration of R, Java, and Scala.
|
||
* [reticulate <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://cran.r-project.org/web/packages/reticulate/index.html) - Interface to 'Python'.
|
||
* [rJython](http://cran.r-project.org/web/packages/rJython/index.html) - R interface to Python via Jython.
|
||
* [rPython](http://cran.r-project.org/web/packages/rPython/index.html) - Package allowing R to call Python.
|
||
* [runr](https://github.com/yihui/runr) - Run Julia and Bash from R.
|
||
* [RJulia](https://github.com/armgong/RJulia) - R package Call Julia.
|
||
* [JuliaCall](https://github.com/Non-Contradiction/JuliaCall) - Seamless Integration Between R and Julia.
|
||
* [RinRuby](https://sites.google.com/a/ddahl.org/rinruby-users/) - a Ruby library that integrates the R interpreter in Ruby.
|
||
* [R.matlab](http://cran.r-project.org/web/packages/R.matlab/index.html) - Read and write of MAT files together with R-to-MATLAB connectivity.
|
||
* [RcppOctave](https://github.com/renozao/RcppOctave) - Seamless Interface to Octave and Matlab.
|
||
* [RSPerl](http://www.omegahat.org/RSPerl/) - A bidirectional interface for calling R from Perl and Perl from R.
|
||
* [V8](https://github.com/jeroenooms/V8) - Embedded JavaScript Engine.
|
||
* [htmlwidgets](http://www.htmlwidgets.org/) - Bring the best of JavaScript data visualization to R.
|
||
* [rpy2](http://rpy.sourceforge.net/) - Python interface for R.
|
||
|
||
## Database Management
|
||
*Packages for managing data.*
|
||
|
||
* [RODBC](http://cran.r-project.org/web/packages/RODBC/) - ODBC database access for R.
|
||
* [DBI](https://github.com/rstats-db/DBI) - Defines a common interface between the R and database management systems.
|
||
* [elastic](https://github.com/ropensci/elastic) - Wrapper for the Elasticsearch HTTP API
|
||
* [mongolite](https://github.com/jeroenooms/mongolite) - Streaming Mongo Client for R
|
||
* [odbc](https://github.com/r-dbi/odbc) - Connect to ODBC databases (using the DBI interface)
|
||
* [RMariaDB](https://github.com/rstats-db/RMariaDB) - An R interface to MariaDB (a replacement for the old RMySQL package)
|
||
* [RMySQL](http://cran.r-project.org/web/packages/RMySQL/) - R interface to the MySQL database.
|
||
* [ROracle](http://cran.r-project.org/web/packages/ROracle/index.html) - OCI based Oracle database interface for R.
|
||
* [RPostgres](https://github.com/r-dbi/RPostgres) - an DBI-compliant interface to the postgres database.
|
||
* [RPostgreSQL](https://code.google.com/p/rpostgresql/) - R interface to the PostgreSQL database system.
|
||
* [RSQLite](http://cran.r-project.org/web/packages/RSQLite/) - SQLite interface for R
|
||
* [RJDBC](http://cran.r-project.org/web/packages/RJDBC/) - Provides access to databases through the JDBC interface.
|
||
* [rmongodb](https://github.com/mongosoup/rmongodb) - R driver for MongoDB.
|
||
* [redux](https://github.com/richfitz/redux) - Redis client for R.
|
||
* [RCassandra](http://cran.r-project.org/web/packages/RCassandra/index.html) - Direct interface (not Java) to the most basic functionality of Apache Cassandra.
|
||
* [RHive](https://github.com/nexr/RHive) - R extension facilitating distributed computing via Apache Hive.
|
||
* [RNeo4j](https://github.com/nicolewhite/Rneo4j) - Neo4j graph database driver.
|
||
* [rpostgis](https://github.com/mablab/rpostgis) - R interface to PostGIS database and get spatial objects in R.
|
||
|
||
## Machine Learning
|
||
*Packages for making R cleverer.*
|
||
|
||
* [anomalize](https://github.com/business-science/anomalize) - Tidy Anomaly Detection using Twitter's AnomalyDetection method.
|
||
* [AnomalyDetection <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/twitter/AnomalyDetection) - AnomalyDetection R package from Twitter.
|
||
* [ahaz](http://cran.r-project.org/web/packages/ahaz/index.html) - Regularization for semiparametric additive hazards regression.
|
||
* [arules](http://cran.r-project.org/web/packages/arules/index.html) - Mining Association Rules and Frequent Itemsets
|
||
* [bigrf](http://cran.r-project.org/web/packages/bigrf/index.html) - Big Random Forests: Classification and Regression Forests for
|
||
Large Data Sets
|
||
* [bigRR](http://cran.r-project.org/web/packages/bigRR/index.html) - Generalized Ridge Regression (with special advantage for p >> n
|
||
cases)
|
||
* [bmrm](http://cran.r-project.org/web/packages/bmrm/index.html) - Bundle Methods for Regularized Risk Minimization Package
|
||
* [Boruta](http://cran.r-project.org/web/packages/Boruta/index.html) - A wrapper algorithm for all-relevant feature selection
|
||
* [BreakoutDetection <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/twitter/BreakoutDetection) - Breakout Detection via Robust E-Statistics from Twitter.
|
||
* [bst](http://cran.r-project.org/web/packages/bst/index.html) - Gradient Boosting
|
||
* [CausalImpact <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/google/CausalImpact) - Causal inference using Bayesian structural time-series models.
|
||
* [C50](http://cran.r-project.org/web/packages/C50/index.html) - C5.0 Decision Trees and Rule-Based Models
|
||
* [caret <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://cran.r-project.org/web/packages/caret/index.html) - Classification and Regression Training
|
||
* [Clever Algorithms For Machine Learning](https://github.com/jbrownlee/CleverAlgorithmsMachineLearning)
|
||
* [CORElearn](http://cran.r-project.org/web/packages/CORElearn/index.html) - Classification, regression, feature evaluation and ordinal
|
||
evaluation
|
||
* [CoxBoost](http://cran.r-project.org/web/packages/CoxBoost/index.html) - Cox models by likelihood based boosting for a single survival
|
||
endpoint or competing risks
|
||
* [Cubist](http://cran.r-project.org/web/packages/Cubist/index.html) - Rule- and Instance-Based Regression Modeling
|
||
* [e1071](http://cran.r-project.org/web/packages/e1071/index.html) - Misc Functions of the Department of Statistics (e1071), TU Wien
|
||
* [earth](http://cran.r-project.org/web/packages/earth/index.html) - Multivariate Adaptive Regression Spline Models
|
||
* [elasticnet](http://cran.r-project.org/web/packages/elasticnet/index.html) - Elastic-Net for Sparse Estimation and Sparse PCA
|
||
* [ElemStatLearn](http://cran.r-project.org/web/packages/ElemStatLearn/index.html) - Data sets, functions and examples from the book: "The Elements
|
||
of Statistical Learning, Data Mining, Inference, and
|
||
Prediction" by Trevor Hastie, Robert Tibshirani and Jerome
|
||
Friedman
|
||
* [evtree](http://cran.r-project.org/web/packages/evtree/index.html) - Evolutionary Learning of Globally Optimal Trees
|
||
* [fable](https://github.com/tidyverts/fable/) - a collection of commonly used univariate and multivariate time series forecasting models
|
||
* [prophet <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/facebookincubator/prophet) - Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.
|
||
* [FSelector](https://cran.r-project.org/web/packages/FSelector/index.html) - A feature selection framework, based on subset-search or feature ranking approches.
|
||
* [frbs](http://cran.r-project.org/web/packages/frbs/index.html) - Fuzzy Rule-based Systems for Classification and Regression Tasks
|
||
* [GAMBoost](http://cran.r-project.org/web/packages/GAMBoost/index.html) - Generalized linear and additive models by likelihood based
|
||
boosting
|
||
* [gamboostLSS](http://cran.r-project.org/web/packages/gamboostLSS/index.html) - Boosting Methods for GAMLSS
|
||
* [gbm](http://cran.r-project.org/web/packages/gbm/index.html) - Generalized Boosted Regression Models
|
||
* [glmnet <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://cran.r-project.org/web/packages/glmnet/index.html) - Lasso and elastic-net regularized generalized linear models
|
||
* [glmpath](http://cran.r-project.org/web/packages/glmpath/index.html) - L1 Regularization Path for Generalized Linear Models and Cox
|
||
Proportional Hazards Model
|
||
* [GMMBoost](http://cran.r-project.org/web/packages/GMMBoost/index.html) - Likelihood-based Boosting for Generalized mixed models
|
||
* [grplasso](http://cran.r-project.org/web/packages/grplasso/index.html) - Fitting user specified models with Group Lasso penalty
|
||
* [grpreg](http://cran.r-project.org/web/packages/grpreg/index.html) - Regularization paths for regression models with grouped
|
||
covariates
|
||
* [h2o <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://cran.r-project.org/web/packages/h2o/index.html) - Deeplearning, Random forests, GBM, KMeans, PCA, GLM
|
||
* [hda](http://cran.r-project.org/web/packages/hda/index.html) - Heteroscedastic Discriminant Analysis
|
||
* [ipred](http://cran.r-project.org/web/packages/ipred/index.html) - Improved Predictors
|
||
* [kernlab](http://cran.r-project.org/web/packages/kernlab/index.html) - kernlab: Kernel-based Machine Learning Lab
|
||
* [klaR](http://cran.r-project.org/web/packages/klaR/index.html) - Classification and visualization
|
||
* [kohonen](http://cran.r-project.org/web/packages/kohonen/) - Supervised and Unsupervised Self-Organising Maps.
|
||
* [L0Learn](https://cran.r-project.org/web/packages/L0Learn/index.html) - Fast algorithms for best subset selection
|
||
* [lars](http://cran.r-project.org/web/packages/lars/index.html) - Least Angle Regression, Lasso and Forward Stagewise
|
||
* [lasso2](http://cran.r-project.org/web/packages/lasso2/index.html) - L1 constrained estimation aka ‘lasso’
|
||
* [LiblineaR](http://cran.r-project.org/web/packages/LiblineaR/index.html) - Linear Predictive Models Based On The Liblinear C/C++ Library
|
||
* [lightgbm <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://cran.r-project.org/web/packages/lightgbm/index.html) - Light Gradient Boosting Machine.
|
||
* [lme4 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/lme4/lme4) - Mixed-effects models
|
||
* [nlme <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://cran.r-project.org/web/packages/nlme/index.html) - Mixed-effects models, handling user-specified matrix of residual covariance, relevant for the analysis of repeated observations in longitudinal trials
|
||
* [glmmTMB](https://cran.r-project.org/web/packages/glmmTMB/index.html) - Generalized mixed-effects models, handling user-specified matrix of residual covariance, relevant for the analysis of repeated observations in longitudinal trials
|
||
* [LogicReg](http://cran.r-project.org/web/packages/LogicReg/index.html) - Logic Regression
|
||
* [maptree](http://cran.r-project.org/web/packages/maptree/index.html) - Mapping, pruning, and graphing tree models
|
||
* [mboost](http://cran.r-project.org/web/packages/mboost/index.html) - Model-Based Boosting
|
||
* [Machine Learning For Hackers <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/johnmyleswhite/ML_for_Hackers)
|
||
* [mlr](https://github.com/mlr-org/mlr) - Extensible framework for classification, regression, survival analysis and clustering [DEPRECIATED]
|
||
* [mlr3 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/mlr-org/mlr3) - Next generation extensible framework for classification, regression, survival analysis and clustering
|
||
* [mvpart](http://cran.r-project.org/web/packages/mvpart/index.html) - Multivariate partitioning
|
||
* [MXNet <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/dmlc/mxnet/tree/master/R-package) - MXNet brings flexible and efficient GPU computing and state-of-art deep learning to R.
|
||
* [ncvreg](http://cran.r-project.org/web/packages/ncvreg/index.html) - Regularization paths for SCAD- and MCP-penalized regression
|
||
models
|
||
* [nnet](http://cran.r-project.org/web/packages/nnet/index.html) - eed-forward Neural Networks and Multinomial Log-Linear Models
|
||
* [oblique.tree](http://cran.r-project.org/web/packages/oblique.tree/index.html) - Oblique Trees for Classification Data
|
||
* [pamr](http://cran.r-project.org/web/packages/pamr/index.html) - Pam: prediction analysis for microarrays
|
||
* [party](http://cran.r-project.org/web/packages/party/index.html) - A Laboratory for Recursive Partytioning
|
||
* [partykit](http://cran.r-project.org/web/packages/partykit/index.html) - A Toolkit for Recursive Partytioning
|
||
* [penalized](http://cran.r-project.org/web/packages/penalized/index.html) - L1 (lasso and fused lasso) and L2 (ridge) penalized estimation
|
||
in GLMs and in the Cox model
|
||
* [penalizedLDA](http://cran.r-project.org/web/packages/penalizedLDA/index.html) - Penalized classification using Fisher's linear discriminant
|
||
* [penalizedSVM](http://cran.r-project.org/web/packages/penalizedSVM/index.html) - Feature Selection SVM using penalty functions
|
||
* [quantregForest](http://cran.r-project.org/web/packages/quantregForest/index.html) - quantregForest: Quantile Regression Forests
|
||
* [randomForest](http://cran.r-project.org/web/packages/randomForest/index.html) - randomForest: Breiman and Cutler's random forests for classification and regression.
|
||
* [randomForestSRC](http://cran.r-project.org/web/packages/randomForestSRC/index.html) - randomForestSRC: Random Forests for Survival, Regression and Classification (RF-SRC).
|
||
* [ranger](https://github.com/imbs-hl/ranger) - A Fast Implementation of Random Forests.
|
||
* [rattle](http://cran.r-project.org/web/packages/rattle/index.html) - Graphical user interface for data mining in R.
|
||
* [rda](http://cran.r-project.org/web/packages/rda/index.html) - Shrunken Centroids Regularized Discriminant Analysis
|
||
* [rdetools](http://cran.r-project.org/web/packages/rdetools/index.html) - Relevant Dimension Estimation (RDE) in Feature Spaces
|
||
* [REEMtree](http://cran.r-project.org/web/packages/REEMtree/index.html) - Regression Trees with Random Effects for Longitudinal (Panel)
|
||
Data
|
||
* [relaxo](http://cran.r-project.org/web/packages/relaxo/index.html) - Relaxed Lasso
|
||
* [rgenoud](http://cran.r-project.org/web/packages/rgenoud/index.html) - R version of GENetic Optimization Using Derivatives
|
||
* [rgp](http://cran.r-project.org/web/packages/rgp/index.html) - R genetic programming framework
|
||
* [Rmalschains](http://cran.r-project.org/web/packages/Rmalschains/index.html) - Continuous Optimization using Memetic Algorithms with Local
|
||
Search Chains (MA-LS-Chains) in R
|
||
* [rminer](http://cran.r-project.org/web/packages/rminer/index.html) - Simpler use of data mining methods (e.g. NN and SVM) in
|
||
classification and regression
|
||
* [ROCR](http://cran.r-project.org/web/packages/ROCR/index.html) - Visualizing the performance of scoring classifiers
|
||
* [RoughSets](http://cran.r-project.org/web/packages/RoughSets/index.html) - Data Analysis Using Rough Set and Fuzzy Rough Set Theories
|
||
* [rpart](http://cran.r-project.org/web/packages/rpart/index.html) - Recursive Partitioning and Regression Trees
|
||
* [RPMM](http://cran.r-project.org/web/packages/RPMM/index.html) - Recursively Partitioned Mixture Model
|
||
* [RSNNS](http://cran.r-project.org/web/packages/RSNNS/index.html) - Neural Networks in R using the Stuttgart Neural Network
|
||
Simulator (SNNS)
|
||
* [Rsomoclu](https://cran.r-project.org/web/packages/Rsomoclu/index.html) - Parallel implementation of self-organizing maps.
|
||
* [RWeka](http://cran.r-project.org/web/packages/RWeka/index.html) - R/Weka interface
|
||
* [RXshrink](http://cran.r-project.org/web/packages/RXshrink/index.html) - RXshrink: Maximum Likelihood Shrinkage via Generalized Ridge or Least
|
||
Angle Regression
|
||
* [sda](http://cran.r-project.org/web/packages/sda/index.html) - Shrinkage Discriminant Analysis and CAT Score Variable Selection
|
||
* [SDDA](http://cran.r-project.org/web/packages/SDDA/index.html) - Stepwise Diagonal Discriminant Analysis
|
||
* [SuperLearner](https://github.com/ecpolley/SuperLearner) and [subsemble](http://cran.r-project.org/web/packages/subsemble/index.html) - Multi-algorithm ensemble learning packages.
|
||
* [survminer](https://github.com/kassambara/survminer) - Survival Analysis & Visualization
|
||
* [survival](https://cran.r-project.org/web/packages/survival/index.html) - Survival Analysis
|
||
* [svmpath](http://cran.r-project.org/web/packages/svmpath/index.html) - svmpath: the SVM Path algorithm
|
||
* [tgp](http://cran.r-project.org/web/packages/tgp/index.html) - Bayesian treed Gaussian process models
|
||
* [tidymodels](https://cran.r-project.org/web/packages/tidymodels/index.html) - A collection of packages for modeling and statistical analysis that share the underlying design philosophy, grammar, and data structures of the tidyverse.
|
||
* [torch](https://cran.r-project.org/web/packages/torch/index.html) - Tensors and Neural Networks with 'GPU' Acceleration.
|
||
* [tree](http://cran.r-project.org/web/packages/tree/index.html) - Classification and regression trees
|
||
* [varSelRF](http://cran.r-project.org/web/packages/varSelRF/index.html) - Variable selection using random forests
|
||
* [xgboost <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/tqchen/xgboost/tree/master/R-package) - eXtreme Gradient Boosting Tree model, well known for its speed and performance.
|
||
|
||
## Natural Language Processing
|
||
*Packages for Natural Language Processing.*
|
||
|
||
* [text2vec](https://github.com/dselivanov/text2vec) - Fast Text Mining Framework for Vectorization and Word Embeddings.
|
||
* [tm](http://cran.r-project.org/web/packages/tm/index.html) - A comprehensive text mining framework for R.
|
||
* [openNLP](http://cran.r-project.org/web/packages/openNLP/index.html) - Apache OpenNLP Tools Interface.
|
||
* [koRpus](http://cran.r-project.org/web/packages/koRpus/index.html) - An R Package for Text Analysis.
|
||
* [zipfR](http://cran.r-project.org/web/packages/zipfR/index.html) - Statistical models for word frequency distributions.
|
||
* [NLP](http://cran.r-project.org/web/packages/NLP/index.html) - Basic functions for Natural Language Processing.
|
||
* [LDAvis](https://github.com/cpsievert/LDAvis) - Interactive visualization of topic models.
|
||
* [topicmodels](https://cran.r-project.org/web/packages/topicmodels/index.html) - Topic modeling interface to the C code developed by by David M. Blei for Topic Modeling (Latent Dirichlet Allocation (LDA), and Correlated Topics Models (CTM)).
|
||
* [syuzhet](https://cran.r-project.org/web/packages/syuzhet/index.html) - Extracts sentiment from text using three different sentiment dictionaries.
|
||
* [SnowballC](https://cran.rstudio.com/web/packages/SnowballC/index.html) - Snowball stemmers based on the C libstemmer UTF-8 library.
|
||
* [quanteda](https://github.com/kbenoit/quanteda) - R functions for Quantitative Analysis of Textual Data.
|
||
* [Topic Models Resources](https://github.com/trinker/topicmodels_learning) - Topic Models learning and R related resources.
|
||
* [NLP for <img src="https://assets-cdn.github.com/images/icons/emoji/unicode/1f1e8-1f1f3.png" width="20" heigth="20" align="absmiddle" class="emoji" alt=":cn:">](https://github.com/BZRLC/R-notes/blob/master/NLP/readme.md) - NLP related resources in R. @Chinese
|
||
* [MonkeyLearn](https://github.com/masalmon/monkeylearn) - 🐒 R package for text analysis with Monkeylearn 🐒.
|
||
* [tidytext](http://tidytextmining.com/index.html) - Implementing tidy principles of Hadley Wickham to text mining.
|
||
* [utf8](https://github.com/patperry/r-utf8) - Manipulating and printing UTF-8 text that fixes multiple bugs in R's UTF-8 handling.
|
||
* [corporaexplorer](https://kgjerde.github.io/corporaexplorer/) - Dynamic exploration of text collections
|
||
|
||
## Bayesian
|
||
*Packages for Bayesian Inference.*
|
||
|
||
* [brms](https://cran.r-project.org/web/packages/brms/index.html) - High-level interface for Bayesian regression models using Stan.
|
||
* [coda](http://cran.r-project.org/web/packages/coda/index.html) - Output analysis and diagnostics for MCMC.
|
||
* [mcmc](http://cran.r-project.org/web/packages/mcmc/index.html) - Markov Chain Monte Carlo.
|
||
* [MCMCpack](http://mcmcpack.berkeley.edu/) - Markov chain Monte Carlo (MCMC) Package.
|
||
* [R2WinBUGS](http://cran.r-project.org/web/packages/R2WinBUGS/index.html) - Running WinBUGS and OpenBUGS from R / S-PLUS.
|
||
* [BRugs](http://cran.r-project.org/web/packages/BRugs/index.html) - R interface to the OpenBUGS MCMC software.
|
||
* [rjags](http://cran.r-project.org/web/packages/rjags/index.html) - R interface to the JAGS MCMC library.
|
||
* [rstan <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://mc-stan.org/interfaces/rstan.html) - R interface to the Stan MCMC software.
|
||
|
||
## Optimization
|
||
*Packages for Optimization.*
|
||
|
||
* [lpSolve](https://cran.rstudio.com/web/packages/lpSolve/index.html) - Interface to `Lp_solve` to Solve Linear/Integer Programs.
|
||
* [minqa](https://cran.rstudio.com/web/packages/minqa/index.html) - Derivative-free optimization algorithms by quadratic approximation.
|
||
* [nloptr](https://cran.rstudio.com/web/packages/nloptr/index.html) - NLopt is a free/open-source library for nonlinear optimization.
|
||
* [ompr](https://cran.rstudio.com/web/packages/ompr/index.html) - Model mixed integer linear programs in an algebraic way directly in R.
|
||
* [Rglpk](https://cran.rstudio.com/web/packages/Rglpk/index.html) - R/GNU Linear Programming Kit Interface
|
||
* [ROI](https://cran.rstudio.com/web/packages/ROI/index.html) - The R Optimization Infrastructure ('ROI') is a sophisticated framework for handling optimization problems in R.
|
||
|
||
## Finance
|
||
*Packages for dealing with money.*
|
||
|
||
* [quantmod <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://www.quantmod.com/) - Quantitative Financial Modelling & Trading Framework for R.
|
||
* [pedquant](http://pedquant.com/) - Public Economic Data and Quantitative Analysis
|
||
* [TTR](http://cran.r-project.org/web/packages/TTR/index.html) - Functions and data to construct technical trading rules with R.
|
||
* [PerformanceAnalytics](http://cran.r-project.org/web/packages/PerformanceAnalytics/index.html) - Econometric tools for performance and risk analysis.
|
||
* [zoo <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://cran.r-project.org/web/packages/zoo/index.html) - S3 Infrastructure for Regular and Irregular Time Series.
|
||
* [xts](http://cran.r-project.org/web/packages/xts/index.html) - eXtensible Time Series.
|
||
* [tseries](http://cran.r-project.org/web/packages/tseries/index.html) - Time series analysis and computational finance.
|
||
* [fAssets](http://cran.r-project.org/web/packages/fAssets/index.html) - Analysing and Modelling Financial Assets.
|
||
* [scorecard](https://github.com/ShichenXie/scorecard) - Credit Risk Scorecard
|
||
|
||
## Bioinformatics and Biostatistics
|
||
*Packages for processing biological datasets.*
|
||
|
||
* [Bioconductor <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://www.bioconductor.org/) - Tools for the analysis and comprehension of high-throughput genomic data.
|
||
* [genetics](http://cran.r-project.org/web/packages/genetics/index.html) - Classes and methods for handling genetic data.
|
||
* [gap](http://cran.r-project.org/web/packages/gap/index.html) - An integrated package for genetic data analysis of both population and family data.
|
||
* [ape](http://cran.r-project.org/web/packages/ape/index.html) - Analyses of Phylogenetics and Evolution.
|
||
* [pheatmap](http://cran.r-project.org/web/packages/pheatmap/index.html) - Pretty heatmaps made easy.
|
||
* [lme4](https://github.com/lme4/lme4) - Generalized mixed-effects models.
|
||
* [nlme](https://cran.r-project.org/web/packages/nlme/index.html) - Mixed-effects models, handling user-specified matrix of residual covariance, relevant for the anaysis of repeated observations in longitudinal trials.
|
||
* [glmmTMB](https://cran.r-project.org/web/packages/glmmTMB/index.html) - Generalized mixed-effects models, handling user-specified matrix of residual covariance, relevant for the anaysis of repeated observations in longitudinal trials.
|
||
|
||
## Network Analysis
|
||
*Packages to construct, analyze and visualize network data.*
|
||
|
||
* [Network Analysis List](https://github.com/briatte/awesome-network-analysis) - Network Analysis related resources.
|
||
* [igraph <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://igraph.org/r/) - A collection of network analysis tools.
|
||
* [network](https://cran.r-project.org/web/packages/network/index.html) - Basic tools to manipulate relational data in R.
|
||
* [sna](https://cran.r-project.org/web/packages/sna/index.html) - Basic network measures and visualization tools.
|
||
* [netdiffuseR](https://github.com/USCCANA/netdiffuseR) - Tools for Analysis of Network Diffusion.
|
||
* [networkDynamic](https://cran.r-project.org/web/packages/networkDynamic/) - Support for dynamic, (inter)temporal networks.
|
||
* [ndtv](https://cran.r-project.org/web/packages/ndtv/) - Tools to construct animated visualizations of dynamic network data in various formats.
|
||
* [statnet](http://statnet.org/) - The project behind many R network analysis packages.
|
||
* [ergm](https://cran.r-project.org/web/packages/ergm/index.html) - Exponential random graph models in R.
|
||
* [latentnet](https://cran.r-project.org/web/packages/latentnet/index.html) - Latent position and cluster models for network objects.
|
||
* [tnet](https://cran.r-project.org/web/packages/tnet/index.html) - Network measures for weighted, two-mode and longitudinal networks.
|
||
* [rgexf](https://bitbucket.org/gvegayon/rgexf/wiki/Home) - Export network objects from R to [GEXF](http://gexf.net/format/), for manipulation with network software like [Gephi](https://gephi.org/) or [Sigma](http://sigmajs.org/).
|
||
* [visNetwork](https://github.com/datastorm-open/visNetwork) - Using vis.js library for network visualization.
|
||
* [tidygraph](https://github.com/thomasp85/tidygraph) - A tidy API for graph manipulation
|
||
|
||
## Spatial
|
||
*Packages to explore the earth.*
|
||
|
||
* [CRAN Task View: Analysis of Spatial Data](https://cran.r-project.org/web/views/Spatial.html)- Spatial Analysis related resources.
|
||
* [Leaflet](http://rstudio.github.io/leaflet/) - One of the most popular JavaScript libraries interactive maps.
|
||
* [ggmap](https://github.com/dkahle/ggmap) - Plotting maps in R with ggplot2.
|
||
* [REmap](https://github.com/Lchiffon/REmap) - R interface to the JavaScript library ECharts for interactive map data visualization.
|
||
* [sf](https://cran.r-project.org/web/packages/sf/index.html) - Improved Classes and Methods for Spatial Data.
|
||
* [sp](https://edzer.github.io/sp/) - Classes and Methods for Spatial Data.
|
||
* [rgeos](https://cran.r-project.org/web/packages/rgeos/index.html) - Interface to Geometry Engine - Open Source
|
||
* [rgdal](https://cran.r-project.org/web/packages/rgdal/index.html) - Bindings for the Geospatial Data Abstraction Library
|
||
* [maptools](https://cran.r-project.org/web/packages/maptools/index.html) - Tools for Reading and Handling Spatial Objects
|
||
* [gstat](https://github.com/edzer/gstat) - Spatial and spatio-temporal geostatistical modelling, prediction and simulation.
|
||
* [spacetime](https://github.com/edzer/spacetime) - R classes and methods for spatio-temporal data.
|
||
* [RColorBrewer](https://cran.r-project.org/web/packages/RColorBrewer/index.html) - Provides color schemes for maps
|
||
* [spatstat](https://github.com/spatstat/spatstat) - Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
|
||
* [spdep](https://cran.r-project.org/web/packages/spdep/index.html) - Spatial Dependence: Weighting Schemes, Statistics and Models
|
||
* [tigris](https://github.com/walkerke/tigris) - Download and use Census TIGER/Line shapefiles in R
|
||
* [GWmodel](https://cran.r-project.org/web/packages/GWmodel/) - Geographically-Weighted Models
|
||
* [tmap](https://github.com/mtennekes/tmap) - R package for thematic maps
|
||
|
||
|
||
## R Development
|
||
*Packages for packages.*
|
||
|
||
* [Package Development List](https://github.com/ropensci/PackageDevelopment) - R packages to improve package development.
|
||
* [promises](https://cran.r-project.org/web/packages/promises/index.html) - Abstractions for Promise-Based Asynchronous Programming
|
||
* [devtools <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/devtools) - Tools to make an R developer's life easier.
|
||
* [testthat <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/testthat) - An R package to make testing fun.
|
||
* [R6 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/wch/R6) - simpler, faster, lighter-weight alternative to R's built-in classes.
|
||
* [pryr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/hadley/pryr) - Make it easier to understand what's going on in R.
|
||
* [roxygen <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/klutometis/roxygen) - Describe your functions in comments next to their definitions.
|
||
* [lineprof](https://github.com/hadley/lineprof) - Visualise line profiling results in R.
|
||
* [renv <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/rstudio/renv) - Make your R projects more isolated, portable, and reproducible.
|
||
* [installr](https://github.com/talgalili/installr/) - Functions for installing softwares from within R (for Windows).
|
||
* [import](https://github.com/smbache/import/) - An import mechanism for R.
|
||
* [box <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/klmr/box) - A modern module system for R.
|
||
* [Rocker <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/rocker-org) - R configurations for [Docker](https://www.docker.com/).
|
||
* [RStudio Addins](https://github.com/daattali/rstudio-addins) - List of RStudio addins.
|
||
* [drat](https://github.com/eddelbuettel/drat) - Creation and use of R repositories on GitHub or other repos.
|
||
* [covr](https://github.com/jimhester/covr) - Test coverage for your R package and (optionally) upload the results to [coveralls](https://coveralls.io/) or [codecov](https://codecov.io/).
|
||
* [lintr](https://github.com/jimhester/lintr) - Static code analysis for R to enforce code style.
|
||
* [staticdocs](https://github.com/hadley/staticdocs) - Generate static html documentation for an R package.
|
||
* [sinew](https://github.com/metrumresearchgroup/sinew) - Generate roxygen2 skeletons populated with information scraped from the function script.
|
||
|
||
## Logging
|
||
*Packages for Logging*
|
||
|
||
* [futile.logger](https://github.com/zatonovo/futile.logger) - A logging package in R similar to log4j
|
||
* [log4r](https://github.com/johnmyleswhite/log4r) - A log4j derivative for R
|
||
* [logging](https://cran.r-project.org/web/packages/logging/index.html) - A logging package emulating the python logging package.
|
||
|
||
## Data Packages
|
||
*Handy Data Packages*
|
||
|
||
* [engsoccerdata](https://github.com/jalapic/engsoccerdata) - English and European soccer results 1871-2016.
|
||
* [gapminder](http://github.com/jennybc/gapminder) - Excerpt from the Gapminder dataset (data about countries through the past 50 years).
|
||
* [wbstats](https://cran.r-project.org/web/packages/wbstats/index.html) - Tools for searching and downloading data and statistics from the World Bank Data API and the World Bank Data Catalog API.
|
||
* [ICON](https://github.com/rrrlw/ICON) - complex systems & networks datasets from the Index of COmplex Networks (ICON) database [webpage](http://icon.colorado.edu).
|
||
* [RCOBOLDI](https://github.com/thospfuller/rcoboldi) - Import COBOL CopyBook data files directly into R as properly structured data frames. Package builds are available via [Drat](https://github.com/thospfuller/drat) and [DockerHub](https://hub.docker.com/r/thospfuller/rcoboldi-rocker-rstudio).
|
||
|
||
## Other Tools
|
||
*Handy Tools for R*
|
||
|
||
* [git2r](https://github.com/ropensci/git2r) - Gives you programmatic access to Git repositories from R.
|
||
* [Conda](https://anaconda.org/r/repo) - Most R packages are available through the Conda polyglot cross-platform dependency manager.
|
||
|
||
## Other Interpreters
|
||
*Alternative R engines.*
|
||
|
||
* [CXXR](https://www.cs.kent.ac.uk/projects/cxxr/) - Refactorising R into C++.
|
||
* [fastR](https://bitbucket.org/allr/fastr/wiki/Home) - FastR is an implementation of the R Language in Java atop Truffle and Graal.
|
||
* [pqR](http://www.pqr-project.org/) - a "pretty quick" implementation of R
|
||
* [renjin](http://www.renjin.org/) - a JVM-based interpreter for R.
|
||
* [rho](https://github.com/rho-devel/rho) - Refactor the interpreter of the R language into a fully-compatible, efficient, VM for R.
|
||
* [riposte](https://github.com/jtalbot/riposte) - a fast interpreter and JIT for R.
|
||
* [TERR](http://spotfire.tibco.com/discover-spotfire/what-does-spotfire-do/predictive-analytics/tibco-enterprise-runtime-for-r-terr) - TIBCO Enterprise Runtime for R.
|
||
|
||
|
||
## Learning R
|
||
*Packages for Learning R.*
|
||
|
||
* [swirl <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](http://swirlstats.com/) - An interactive R tutorial directly in your R console.
|
||
* [DataScienceR <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://github.com/ujjwalkarn/DataScienceR) - a list of R tutorials for Data Science, NLP and Machine Learning.
|
||
|
||
# Resources
|
||
|
||
Where to discover new R-esources.
|
||
|
||
## Websites
|
||
|
||
### Manuals
|
||
|
||
* [R-project](http://www.r-project.org/) - The R Project for Statistical Computing.
|
||
* [An Introduction to R](https://cran.r-project.org/doc/manuals/R-intro.pdf) - A very good introductory text on R, also covers some advanced topic. See also the `Manuals` section on [CRAN](https://cran.r-project.org/manuals.html)
|
||
* [CRAN Contributed Docs](https://cran.r-project.org/other-docs.html) - CRAN Contributed Documentation in many languages.
|
||
* [Quick-R](http://www.statmethods.net/) - An excellent quick reference
|
||
* [tryR](http://tryr.codeschool.com/) - A quick course for getting started with R.
|
||
|
||
### Tools and References
|
||
|
||
* [RDocumentation](https://www.rdocumentation.org/) - Search through all CRAN, Bioconductor, Github packages and their archives with RDocumentation.
|
||
* [rdrr.io](https://rdrr.io/) - Find R package documentation. Try R packages in your browser.
|
||
* [CRAN Task Views](http://cran.r-project.org/web/views/) - Task Views for CRAN packages.
|
||
* [rnotebook.io](https://rnotebook.io/) - Create online R Jupyter Notebooks for free.
|
||
|
||
### News and Info
|
||
|
||
* [R Weekly](https://rweekly.org) - Weekly updates about R and Data Science. R Weekly is openly developed on GitHub.
|
||
* [R Bloggers](http://www.r-bloggers.com/) - There are people scattered across the Web who blog about R. This is simply an aggregator of many of those feeds.
|
||
* [R-users](https://www.r-users.com/) - A job board for R users (and the people who are looking to hire them)
|
||
|
||
## Books
|
||
|
||
### Free and Online
|
||
|
||
* [_R for Data Science_ by Garrett Grolemund & Hadley Wickham](http://r4ds.had.co.nz/) - Free book from RStudio developers with emphasis on data science workflow.
|
||
* [_R Cookbook_ by Winston Chang](http://www.cookbook-r.com/) - A problem-oriented online book that supports his [R Graphics Cookbook, 2nd ed. (2018)](http://shop.oreilly.com/product/0636920063704.do).
|
||
* [_Advanced R_, 2nd ed. by Hadley Wickham (2019) <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">](https://adv-r.hadley.nz/) - An online version of the Advanced R book.
|
||
* [_R Packages_, 2nd ed. by Hadley Wickham & Jennifer Bryan](https://r-pkgs.org/) - A book (in paper and website formats) on writing R packages.
|
||
* Books written as part of the Johns Hopkins Data Science Specialization:
|
||
* [_Exploratory Data Analysis with R_ by Roger D. Peng (2016)](https://leanpub.com/exdata) - Basic analytical skills for all sorts of data in R.
|
||
* [_R Programming for Data Science_ by Roger D. Peng (2019)](https://leanpub.com/rprogramming) - More advanced data analysis that relies on R programming.
|
||
* [_Report Writing for Data Science in R_ by Roger D. Peng (2019)](https://leanpub.com/reportwriting) - R-based methods for reproducible research and report generation.
|
||
* [_R for SAS and SPSS users_ by Bob Muenchen (2012)](http://r4stats.com/books/free-version/) - An excellent resource for users already familiar with SAS or SPSS.
|
||
* [_Introduction to Statistical Learning with Application in R_ by Gareth James et al. (2017)](http://faculty.marshall.usc.edu/gareth-james/ISL/) - A simplified and "operational" version of *The Elements of Statistical Learning*. Free softcopy provided by its authors.
|
||
* [_The R Inferno_ by Patrick Burns (2011)](http://www.burns-stat.com/pages/Tutor/R_inferno.pdf) - Patrick Burns gives insight into R's ins and outs along with its quirks!
|
||
* [_Efficient R Programming_ by Colin Gillespie & Robin Lovelace (2017)](https://csgillespie.github.io/efficientR/) - An online version of the O’Reilly book: Efficient R Programming.
|
||
* [The R Programming Wikibook](https://en.wikibooks.org/wiki/R_Programming) - A collaborative handbook for R.
|
||
|
||
### Paid
|
||
|
||
* [The Art of R Programming](http://shop.oreilly.com/product/9781593273842.do) - It's a good resource for systematically learning fundamentals such as types of objects, control statements, variable scope, classes and debugging in R.
|
||
* [_R Cookbook_, 2nd ed. by JD Long & Paul Teetor (2019)](http://shop.oreilly.com/product/0636920174851.do) - A quick and simple introduction to conducting many common statistical tasks with R.
|
||
* [R in Action](http://www.manning.com/kabacoff2/) - This book aims at all levels of users, with sections for beginning, intermediate and advanced R ranging from "Exploring R data structures" to running regressions and conducting factor analyses.
|
||
* [_Use R!_ Series by Springer](http://www.springer.com/series/6991?detailsPage=titles) - This series of inexpensive and focused books from Springer publish shorter books aimed at practitioners. Books can discuss the use of R in a particular subject area, such as Bayesian networks, ggplot2 and Rcpp.
|
||
* [Learning R Programming](https://www.packtpub.com/big-data-and-business-intelligence/learning-r-programming) - Learning R as a programming language from basics to advanced topics.
|
||
|
||
### Book/monograph Lists and Reviews
|
||
|
||
* [R Books List](https://github.com/RomanTsegelskyi/rbooks) - List of R Books.
|
||
* [Readings in Applied Data Science](https://github.com/hadley/stats337) - These readings reflect Hadley's personal thoughts about applied data science.
|
||
|
||
## Podcasts
|
||
|
||
* [Not So Standard Deviations](https://soundcloud.com/nssd-podcast) - The Data Science Podcast.
|
||
* [@Roger Peng](https://twitter.com/rdpeng) and [@Hilary Parker](https://twitter.com/hspter).
|
||
* [R World News](http://www.rworld.news/blog/) - R World News helps you keep up with happenings within the R community.
|
||
* [@Bob Rudis](https://twitter.com/hrbrmstr) and [@Jay Jacobs](https://twitter.com/jayjacobs).
|
||
* [The R-Podcast](https://r-podcast.org/) - Giving practical advice on how to use R.
|
||
* [@Eric Nantz](https://r-podcast.org/stories/contact.html).
|
||
* [R Talk](http://rtalk.org) - News and discussions of statistical software and language R.
|
||
* [@Oliver Keyes](https://twitter.com/quominus), [@Jasmine Dumas](https://twitter.com/jasdumas), [@Ted Hart](https://twitter.com/emhrt_) and [@Mikhail Popov](https://twitter.com/bearloga).
|
||
* [R Weekly](https://rweekly.org) - Weekly news updates about the R community.
|
||
|
||
## Reference Cards
|
||
|
||
* [RStudio Cheat Sheets](https://www.rstudio.com/resources/cheatsheets/)
|
||
* [R Reference Card 2.0](http://cran.r-project.org/doc/contrib/Baggott-refcard-v2.pdf) - Material from R for Beginners by permission of Emmanuel Paradis (Version 2 by Matt Baggott).
|
||
* [Regression Analysis Refcard](http://cran.r-project.org/doc/contrib/Ricci-refcard-regression.pdf) - R Reference Card for Regression Analysis.
|
||
* [Reference Card for ESS](http://ess.r-project.org/refcard.pdf) - Reference Card for ESS.
|
||
|
||
## MOOCs
|
||
*Massive open online courses.*
|
||
|
||
* [Johns Hopkins University Data Science Specialization](https://www.coursera.org/specialization/jhudatascience/1) - 9 courses including: Introduction to R, literate analysis tools, Shiny and some more.
|
||
* [HarvardX Biomedical Data Science](http://simplystatistics.org/2014/11/25/harvardx-biomedical-data-science-open-online-training-curriculum-launches-on-january-19/) - Introduction to R for the Life Sciences.
|
||
* [Explore Statistics with R](https://www.edx.org/course/explore-statistics-r-kix-kiexplorx-0) - Covers introduction, data handling and statistical analysis in R.
|
||
|
||
## Lists
|
||
*Great resources for learning domain knowledge.*
|
||
|
||
* [Books](https://github.com/RomanTsegelskyi/rbooks) - List of R Books.
|
||
* [ggplot2 Extensions](https://ggplot2-exts.github.io/ggiraph.html) - Showcases of ggplot2 extensions.
|
||
* [Natural Language Processing <img src="https://assets-cdn.github.com/images/icons/emoji/unicode/1f1e8-1f1f3.png" width="20" heigth="20" align="absmiddle" class="emoji" alt=":cn:">](https://github.com/BZRLC/R-notes/blob/master/NLP/readme.md) - NLP related resources in R. @Chinese
|
||
* [Network Analysis](https://github.com/briatte/awesome-network-analysis) - Network Analysis related resources.
|
||
* [Open Data](https://github.com/ropensci/opendata) - Using R to obtain, parse, manipulate, create, and share open data.
|
||
* [Posts](https://github.com/qinwf/awesome-R/blob/master/misc/posts.md) - Great R blog posts or Rticles.
|
||
* [Package Development](https://github.com/ropensci/PackageDevelopment) - R packages to improve package development.
|
||
* [R Project Conferences](https://www.r-project.org/conferences.html) - Information about useR! Conferences and DSC Conferences.
|
||
* [RStartHere](https://github.com/rstudio/RStartHere) - A guide to some of the most useful R packages, organized by workflow.
|
||
* [RStudio Addins](https://github.com/daattali/addinslist) - List of RStudio addins.
|
||
* [Topic Models](https://github.com/trinker/topicmodels_learning) - Topic Models learning and R related resources.
|
||
* [Web Technologies](https://github.com/ropensci/webservices) - Information about how to use R and the world wide web together.
|
||
|
||
## R Ecosystems
|
||
|
||
R communities and package collections (in alphabetical order):
|
||
|
||
* [rOpenGov](http://ropengov.github.io/) Open government data, computational social science, digital humanities
|
||
* [rOpenHealth](https://github.com/rOpenHealth) Public health data
|
||
* [rOpenSci](https://ropensci.org) Open science
|
||
|
||
## 2018
|
||
|
||
* [fable](https://github.com/tidyverts/fable) - univariate and multivariate time series forecasting models 
|
||
* [r2d3](https://rstudio.github.io/r2d3/) - R Interface to D3 Visualizations 
|
||
* [rstats-ed](https://github.com/rstudio-education/rstats-ed) - List of courses teaching R
|
||
* [promises](https://cran.r-project.org/web/packages/promises/index.html) - Abstractions for Promise-Based Asynchronous Programming 
|
||
* [tinytex](https://yihui.name/tinytex/) - A lightweight and easy-to-maintain LaTeX distribution 
|
||
* [Readings in Applied Data Science](https://github.com/hadley/stats337) - These readings reflect Hadley's personal thoughts about applied data science.
|
||
|
||
|
||
## 2017
|
||
|
||
* [prophet](https://github.com/facebookincubator/prophet) - Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.
|
||
* [tidyverse](https://github.com/tidyverse/tidyverse) - Easily install and load packages from the tidyverse
|
||
* [purrr](https://github.com/tidyverse/purrr) - A functional programming toolkit for R
|
||
* [hrbrthemes](https://github.com/hrbrmstr/hrbrthemes) - 🔏 Opinionated, typographic-centric ggplot2 themes and theme components
|
||
* [xaringan](https://github.com/yihui/xaringan) - Create HTML5 slides with R Markdown and the JavaScript library
|
||
* [blogdown](https://github.com/rstudio/blogdown) - Create Blogs and Websites with R Markdown
|
||
* [glue](https://github.com/tidyverse/glue) - Glue strings to data in R. Small, fast, dependency free interpreted string literals.
|
||
* [covr](https://github.com/jimhester/covr) - Test coverage reports for R
|
||
* [lintr](https://github.com/jimhester/lintr) - Static Code Analysis for R
|
||
* [reprex](https://github.com/jennybc/reprex) - Render bits of R code for sharing, e.g., on GitHub or StackOverflow.
|
||
* [reticulate](https://github.com/rstudio/reticulate) - R Interface to Python
|
||
* [tensorflow](https://github.com/rstudio/tensorflow) - TensorFlow for R
|
||
* [utf8](https://github.com/patperry/r-utf8) - Manipulating and printing UTF-8 text that fixes multiple bugs in R's UTF-8 handling.
|
||
* [Patchwork](https://github.com/thomasp85/patchwork) - Combine separate ggplots into the same graphic.
|
||
|
||
# Other Awesome Lists
|
||
|
||
* [awesome-awesomeness](https://github.com/bayandin/awesome-awesomeness)
|
||
* [lists](https://github.com/jnv/lists)
|
||
* [awesome-rshiny](https://github.com/grabear/awesome-rshiny)
|
||
|
||
# Contributing
|
||
Your contributions are always welcome!
|
||
|
||
This work is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License - [CC BY-NC-SA 4.0](http://creativecommons.org/licenses/by-nc-sa/4.0/legalcode)
|
||
|
||
[R.md Github](https://github.com/qinwf/awesome-R
|
||
)
|