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Jonas Zeunert
2025-07-18 22:22:32 +02:00
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 Awesome Scientific Writing !Awesome (https://awesome.re/badge-flat.svg) (https://github.com/sindresorhus/awesome)
 Awesome Scientific Writing !Awesome (https://awesome.re/badge-flat.svg) (https://github.com/sindresorhus/awesome)
▐ Scientific writing can extend beyond LaTeX, made possible by formats,
▐ such as
@@ -27,7 +27,7 @@
Word Processors
- Marktext (https://marktext.app/) - Markdown text editor.
- Marktext (https://github.com/marktext/marktext) - Markdown text editor.
- R Studio (https://github.com/rstudio/rstudio) - IDE for R.
 - bookdown (https://github.com/rstudio/bookdown) - R package to facilitate writing books and long-form articles, reports with R Markdown :bookmark: :link:.
 - R Markdown (https://rmarkdown.rstudio.com/) - R package to write R next to Markdown
@@ -110,8 +110,7 @@
- Hunspell (http://hunspell.github.io/) - Command line spell checker.
- LanguageTool (https://languagetool.org/) - Open source grammar, style and
 spell Checker.
- LanguageCheck (https://github.com/JohannesBuchner/languagecheck) - Analyses scientific LaTeX papers, suggesting improvements from a list of common mistakes/ambiguities, tense consistency, a vs. an, spell check, and paragraph topic 
sentences.
- LanguageCheck (https://github.com/JohannesBuchner/languagecheck) - Analyses scientific LaTeX papers, suggesting improvements from a list of common mistakes/ambiguities, tense consistency, a vs. an, spell check, and paragraph topic sentences.
- Markdown lint tool (https://github.com/markdownlint/markdownlint) - Markdown linter.
- proselint (https://github.com/amperser/proselint) - Linter for prose.
- remarklint (https://github.com/remarkjs/remark-lint) - Markdown linter.
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How to generate articles and presentations for scientific purposes.
- 3 frameworks into one — Write your next paper with R Studio! (https://blog.devgenius.io/write-your-whole-paper-in-r-it-is-better-77e1843f0c09) - Article provides an overview to a workflow that combines R Markdown (bookdown), Zotero 
(literature management), and Notion (note taking on research papers) to write academic papers. 
- 3 frameworks into one — Write your next paper with R Studio! (https://blog.devgenius.io/write-your-whole-paper-in-r-it-is-better-77e1843f0c09) - Article provides an overview to a workflow that combines R Markdown (bookdown), Zotero (literature 
management), and Notion (note taking on research papers) to write academic papers. 
- Book on Riemann solvers (https://github.com/clawpack/riemann_book/#readme) - This
 example uses a custom nbconvert template and shows how to store your
 notebooks with no output (for version control) while automatically executing
 them before running bookbook, so that PDF and HTML versions include the
 output.
- Dennis Tenen and Grant Wythoff (https://programminghistorian.org/en/lessons/sustainable-authorship-in-plain-text-using-pandoc-and-markdown) - Sustainable Authorship in Plain Text using Pandoc and Markdown.
- Heads up! Quarto is here to stay. Immediately combine R & Python in your next document (https://blog.devgenius.io/heads-up-quarto-is-here-to-stay-aa861ef87491) - Summary of the capabilities of Quarto, why to use it, and how it 
compares to R Markdown. Also contains tips for M1 Mac users on how to fix a common problem with reticulate.
- Heads up! Quarto is here to stay. Immediately combine R & Python in your next document (https://blog.devgenius.io/heads-up-quarto-is-here-to-stay-aa861ef87491) - Summary of the capabilities of Quarto, why to use it, and how it compares to R 
Markdown. Also contains tips for M1 Mac users on how to fix a common problem with reticulate.
- Katrin Leinweber's Ph.D.
 thesis (https://github.com/katrinleinweber/PhD-thesis/#readme) - Automated
 work flow involving several tools, but primarily Pandoc, latexmk and
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Contribute
Contributions welcome! Read the contribution guidelines (CONTRIBUTING.md) first.
scientificwriting Github: https://github.com/writing-resources/awesome-scientific-writing